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Biomedical Physics
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  4. Biomedical Physics
  5. Doctor of Philosophy

Doctor of Philosophy

PhD
  • Biomedical Physics opens in a new tab
Program Minimum Units
31 Units
University Minimum Units
135 Units
Program Length
6 Years
Interests
Technology, Public Health, Helping Others, Experimentation & Discovery
Academic Areas
Engineering & Computer Science, Health Sciences, Medicine

Overview

The Biomedical Physics PhD program aims to offer unique interdisciplinary training in physics and engineering applied to solve clinical problems. This burgeoning translational field integrates topics including medical physics, diagnostic imaging, and molecular imaging and diagnostics. Synergistic with multiple departments and institutes from the School of Medicine, Engineering, and Humanities and Sciences, the BMP program leverages Stanford’s outstanding faculty, research, and resources to create a world-class training program. It targets physics, bioscience, and engineering students seeking to become the next generation of leaders focused on addressing the technical challenges of clinical medicine.

Requirements

Program Requirements

Program Requirements

  1. Complete the BMP Core and Depth Curriculum (31 or more units).

  2. Meet the university residency requirements for a PhD degree consisting of a minimum of 135 Stanford units, with a maximum of 45 of these units being external transfer credits. 

  3. Achieve a cumulative GPA of 3.0 or greater to maintain good academic standing. 

  4. All courses taken for the program must be completed with a letter grade and must be passed with a grade of B- or better.

  5. Qualifying examination. PhD students will be expected to take and pass an oral qualifying examination during their second year in the program. Students will assemble a qualifying examination committee of eligible faculty per university rules. Following the general structure used in other SoM programs, the examination will consist of a written and oral portion. The written portion will be a 5-page NIH-style proposal of the thesis research, to be distributed to the qualifying examination committee at least one week before the oral examination. The student will present the proposal in a short talk at the oral examination. Qualifying examination committee members will then question the candidate on the proposed research and the underlying science. The examination will cover the proposal and foundational medical physics, imaging, and clinical diagnostics knowledge. The examination committee will then grade the student’s performance as either pass or fail. Students failing the examination will be allowed to retake it once. Students who fail the qualifying examination twice will be offered the option to exit the program with a Master’s degree, having completed the extent of coursework required by Stanford University for this degree.  

  6. After applying for Terminal Graduate Registration (TGR) status and completing 135 units, the PhD candidate should register each quarter for RAD 802 TGR PhD Dissertation so that their research effort may be counted toward the degree. 

Course Requirements

Core Curriculum in Biomedical Physics (22 units). All students are expected to fulfill the following core requirements concerning basic principles of biomedical physics, professionalism and ethics, fundamentals of the human body, and quantitative and computational competencies. Note, given the nature of the subject matter, the curriculum has a structure similar to engineering PhDs, with greater emphasis on coursework compared to the School of Medicine Biosciences Program.

Complete all of the following requirements:
Touchstone Courses

Complete 9 units from the following courses in the first year.

Complete all of the following course(s):
BMP 220

Introduction to Imaging and Image-based Human Anatomy

3-4 Units
BMP 222

Physics and Engineering Principles of Multi-modality Molecular Imaging of Living Subjects

3-4 Units
BMP 253

Biological Principles and Medical Applications of Ionizing Radiation

3 Units
and
Biomedical Physics Seminars

Complete 2 units from the following courses.

Complete all of the following course(s):
BMP 210A

Research Seminar Series for Biomedical Physics

1 Units
BMP 210B

Clinical Seminar Series for Biomedical Physics

1 Units
and
Professionalism and Ethics Course

Complete 1 of the following courses.

Complete any of the following course(s):
BIOE 131

Ethics in Bioengineering

3 Units
MED 255

The Responsible Conduct of Research

1 Units
and
Fundamentals of the Human Body

Complete 4 units. Below is a partial list of applicable classes. Other classes may be used for this requirement with the approval of the program director.

Earn at least 4 units in the following course(s):
BIOE 300A

Molecular and Cellular Bioengineering

4 Units
BIOE 300B

Quantitative Physiology

3 Units
BIOE 301A

Molecular and Cellular Engineering Lab

3 Units
BIOPHYS 294

Cellular Biophysics

3 Units
MCP 256

How Cells Work: Energetics, Compartments, and Coupling in Cell Biology

4 Units
and
Quantitation and Computation in Biomedical Physics

Complete 6 units from the following courses.

Earn at least 6 units in the following course(s):
BMDS 241

Intermediate Biostatistics: Analysis of Discrete Data

3 Units
BMP 260

Computational Methods for Biomedical Image Analysis and Interpretation

3 Units
CS 229

Machine Learning

3-4 Units
CS 230

Deep Learning

3-4 Units
EE 261

The Fourier Transform and Its Applications

3 Units
EE 278

Probability and Statistical Inference

3 Units
EE 368

Digital Image Processing

3 Units
STATS 200

Introduction to Theoretical Statistics

3-4 Units

Depth Requirement

Depth Curriculum in Biomedical Physics (9 units). Each student will also be required to demonstrate depth in a chosen area by completing nine units within a single area of specialization, as given by the examples below or in consultation with their primary advisor. These depth areas are within the scope of the overall Biomedical Physics program and comprise courses that enable a student’s thesis research. Representative courses meeting this depth requirement from three possible areas of specialization (Radiation Physics, Imaging Science, and Molecular Imaging and Diagnostics) are given below. 

Complete any of the following requirements:
Radiation Physics

The following courses are the recommended electives for this specialty.

Complete any of the following course(s):
BMP 221

Physics and Engineering of Radionuclide-based Medical Imaging

3-4 Units
BMP 225

Transcranial Ultrasound Neuromodulation: Physics, Neurophysiology, and Applications

3 Units
BMP 229

MRI Sequences and Signals

3 Units
BMP 235

Advanced Ultrasound Imaging

3 Units
BMP 251

Medical Physics and Dosimetry

3 Units
BMP 252

Physics of Radiation Therapy

3 Units
BMP 253

Biological Principles and Medical Applications of Ionizing Radiation

3 Units
BMP 260

Computational Methods for Biomedical Image Analysis and Interpretation

3 Units
CBIO 240

Molecular and Genetic Basis of Cancer

4 Units
CBIO 242

Cellular and Clinical Aspects of Cancer

4 Units
CBIO 243

Principles of Cancer Systems Biology

3 Units
EE 369A

Medical Imaging Systems I

3 Units
EE 369B

Medical Imaging Systems II

3 Units
EE 369C

Medical Image Reconstruction

3 Units
or
Imaging Science

The following courses are the recommended electives for this specialty.

Complete any of the following course(s):
BMP 206

Mixed-Reality in Medicine

3 Units
BMP 221

Physics and Engineering of Radionuclide-based Medical Imaging

3-4 Units
BMP 224

Probes and Applications for Multi-modality Molecular Imaging of Living Subjects

3 Units
BMP 225

Transcranial Ultrasound Neuromodulation: Physics, Neurophysiology, and Applications

3 Units
BMP 226

MRI Spin Physics, Relaxation Theory, and Contrast Mechanisms

3 Units
BMP 227

Functional MRI Methods

3 Units
BMP 229

MRI Sequences and Signals

3 Units
BMP 235

Advanced Ultrasound Imaging

3 Units
BMP 260

Computational Methods for Biomedical Image Analysis and Interpretation

3 Units
EE 369A

Medical Imaging Systems I

3 Units
EE 369B

Medical Imaging Systems II

3 Units
EE 369C

Medical Image Reconstruction

3 Units
EE 469B

RF Pulse Design for Magnetic Resonance Imaging

3 Units
or
Molecular Imaging and Diagnostics

The following courses are the recommended electives for this specialty.

Complete any of the following course(s):
BIOC 224

Advanced Cell Biology

3 Units
BIOE 217

Translational Bioinformatics

3-4 Units
BIOE 241

Biological Macromolecules

3-5 Units
BIOE 279

Computational Biology: Structure and Organization of Biomolecules and Cells

3 Units
BIOE 450

Advances in Biotechnology

3 Units
BMDS 212

Introduction to Biomedical Informatics Research Methodology

3 Units
BMP 224

Probes and Applications for Multi-modality Molecular Imaging of Living Subjects

3 Units
CBIO 240

Molecular and Genetic Basis of Cancer

4 Units
CBIO 242

Cellular and Clinical Aspects of Cancer

4 Units
CBIO 243

Principles of Cancer Systems Biology

3 Units
CBIO 275

Tumor Immunology

3 Units
EE 369A

Medical Imaging Systems I

3 Units
EE 369B

Medical Imaging Systems II

3 Units
EE 369C

Medical Image Reconstruction

3 Units
IMMUNOL 201

Advanced Immunology I

3 Units
IMMUNOL 205

Immunology in Health and Disease

4 Units
IMMUNOL 206

Introduction to Applied Computational Tools in Immunology

2 Units

Advancement to Candidacy

Advancement to Candidacy

To be admitted to candidacy for the PhD degree, a student will be in good academic standing and have successfully completed the core course requirements, at least 20 units of coursework in an area of specialization, and passed the qualifying examination. The student must fulfill these requirements and apply for admission to candidacy for the PhD by the beginning of the third year. 

Oral Exam

Oral Exam

The University Oral Examination is taken after the student has substantially completed their research. See the Dissertation section for more details.

Dissertation

Dissertation Overview

After completing most of their thesis work and when deemed appropriate by the student and the thesis advisor, typically several months before the expected end of the student’s research, the student will coordinate a thesis defense. The defense committee will typically consist of the thesis committee, a defense chair from outside the program as per university rules, and one other faculty member. The defense will consist of an oral presentation of the thesis work, followed by questions about the thesis or other areas of research and scholarship deemed relevant to the research. Students must present a PhD dissertation that results from independent investigation and contributes to knowledge in biomedical physics. The process for the preparation of a dissertation will include:

  • The selection of a primary dissertation advisor and at least two additional faculty members to serve on the dissertation committee

  • The presentation of a prospectus outlining the proposed research to the committee (generally as part of the qualifying examination)

  • The receipt of written approval from the dissertation committee chair

  • The passing of the university oral examination, taken after the student has substantially completed their research

  • The submission of a final draft of the work signed by all members of the dissertation committee